Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015367.1 Corchorus olitorius cultivar O-4 contig15400, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14618

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--329
62
5.3
62
95
0
588
32
15
16
35
1.90
312--391
30
2.9
28
80
16
105
26
17
21
35
1.95
343--391
24
2.0
24
96
0
89
26
16
22
34
1.95
4304--4350
16
2.8
18
81
12
64
42
2
4
51
1.33
8124--8183
21
2.9
21
69
0
57
28
38
16
16
1.91
13384--13425
15
2.7
15
92
3
66
64
14
9
11
1.50

Tables:   1

The End!