Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015368.1 Corchorus olitorius cultivar O-4 contig15401, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15765

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
636--677
15
2.7
15
92
3
66
64
14
9
11
1.50
2052--2109
29
2.0
29
83
6
73
29
22
10
37
1.87
7244--7314
28
2.8
25
83
12
74
32
11
12
43
1.78
7668--7709
15
2.7
15
92
3
66
64
14
9
11
1.50
12509--12644
54
2.5
53
88
4
193
17
25
12
44
1.84
14194--14238
2
22.5
2
90
0
72
48
2
2
46
1.26
14699--14754
28
1.9
31
85
10
82
25
8
21
44
1.81
14950--14987
15
2.5
16
83
12
53
60
0
0
39
0.97
14945--14982
18
2.0
19
90
10
60
57
0
0
42
0.98
14944--14990
20
2.3
20
82
17
62
53
0
0
46
1.00
15147--15208
30
2.0
31
87
3
90
56
17
8
17
1.64
15616--15644
15
1.9
15
100
0
58
44
6
41
6
1.58

Tables:   1

The End!