Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015374.1 Corchorus olitorius cultivar O-4 contig15407, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27029

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6457--6522
28
2.3
29
84
5
89
30
12
21
36
1.90
7638--7678
18
2.2
20
91
8
68
58
0
0
41
0.98
7633--7676
21
2.0
22
87
12
65
56
0
0
43
0.99
7633--7676
22
2.0
21
87
12
63
56
0
0
43
0.99
10617--10644
14
2.0
14
100
0
56
85
14
0
0
0.59
15463--15526
28
2.2
30
80
5
78
46
17
18
17
1.84
16290--16367
40
2.0
40
97
0
147
30
23
6
39
1.79
16490--16585
49
2.0
49
97
0
183
30
4
40
25
1.74

Tables:   1

The End!