Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015382.1 Corchorus olitorius cultivar O-4 contig15415, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51195

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58--123
2
32.5
2
82
8
80
46
7
0
45
1.31
10037--10074
20
1.9
20
94
0
67
50
5
36
7
1.54
10747--10975
114
2.0
114
97
0
431
28
10
17
43
1.82
16217--16451
117
2.0
117
99
0
461
21
11
21
44
1.84
32465--32528
29
2.1
31
91
5
105
39
12
1
46
1.51
33625--33655
13
2.4
13
94
0
53
29
16
16
38
1.90
44189--44217
10
3.0
10
95
5
51
27
0
0
72
0.85
49590--49633
20
2.2
20
84
4
63
63
2
6
27
1.31

Tables:   1

The End!