Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015398.1 Corchorus olitorius cultivar O-4 contig15431, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10725

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--84
2
42.0
2
100
0
168
0
50
0
50
1.00
5345--5378
6
5.7
6
92
0
50
17
23
14
44
1.86
5339--5378
12
3.3
12
82
0
53
20
25
12
42
1.86
5339--5378
18
2.2
18
90
0
62
20
25
12
42
1.86
9452--9509
19
2.9
20
84
5
73
36
10
22
31
1.88

Tables:   1

The End!