Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015400.1 Corchorus olitorius cultivar O-4 contig15433, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58923

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40568--40629
31
2.0
31
100
0
124
25
25
12
35
1.92
42248--42295
20
2.5
20
86
3
71
64
8
8
18
1.46
42248--42292
19
2.3
19
88
3
63
64
8
6
20
1.44
48974--48998
11
2.3
11
100
0
50
64
0
0
36
0.94
53871--53907
2
18.5
2
100
0
74
48
0
0
51
1.00
54721--54841
61
2.0
61
98
0
233
31
9
12
47
1.72
56622--56646
2
12.5
2
100
0
50
48
0
0
52
1.00
57759--57792
3
11.3
3
100
0
68
67
0
0
32
0.91

Tables:   1

The End!