Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015407.1 Corchorus olitorius cultivar O-4 contig15440, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4022

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
118--206
29
3.2
29
84
12
132
39
14
43
2
1.58
117--182
2
32.0
2
78
6
60
42
12
45
0
1.41
122--206
25
3.2
24
86
6
80
38
15
43
2
1.59
590--695
26
4.2
26
65
26
75
58
20
9
11
1.60
616--866
103
2.5
99
90
7
409
60
19
11
8
1.55
793--845
26
2.0
24
100
0
70
62
22
11
3
1.45
3506--3552
17
2.8
17
80
3
60
55
2
36
6
1.37
3500--3545
17
2.9
16
83
6
58
58
2
32
6
1.36
3495--3558
16
4.0
16
80
6
67
53
1
39
6
1.36
3995--4022
1
28.0
1
100
0
56
100
0
0
0
0.00

Tables:   1

The End!