Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015422.1 Corchorus olitorius cultivar O-4 contig15455, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25909

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1550--1590
1
41.0
1
100
0
82
100
0
0
0
0.00
6744--6782
20
2.0
20
89
0
60
46
15
15
23
1.83
7840--7932
3
31.3
3
96
2
170
33
0
1
65
1.00
8150--8187
19
2.0
20
89
5
60
57
18
0
23
1.40
10102--10155
19
2.9
18
84
10
65
53
5
0
40
1.24
10587--10619
12
2.8
12
95
0
57
39
36
24
0
1.56
11970--12017
23
2.1
23
96
0
87
33
10
22
33
1.88
17514--17539
11
2.4
11
100
0
52
57
0
0
42
0.98
17523--17570
3
15.3
3
82
4
51
60
6
0
33
1.22
17760--17789
6
5.2
6
92
8
53
86
0
13
0
0.57
17760--17789
11
2.6
12
89
10
53
86
0
13
0
0.57
18928--18961
4
8.5
4
100
0
68
0
23
0
76
0.79

Tables:   1

The End!