Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015424.1 Corchorus olitorius cultivar O-4 contig15457, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38424

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--40
2
20.0
2
100
0
80
0
50
0
50
1.00
8076--8107
17
1.9
16
93
6
55
34
21
12
31
1.91
14587--14619
14
2.2
16
89
10
52
24
39
33
3
1.71
18233--18375
72
2.0
72
88
2
216
25
10
27
35
1.89
18403--18550
74
2.0
74
95
0
269
43
12
8
35
1.73
19610--19668
19
3.0
19
80
9
73
30
20
11
37
1.89
20626--20666
3
14.0
3
94
5
75
65
0
0
34
0.93
24552--24578
2
13.5
2
100
0
54
51
0
0
48
1.00
26093--26117
11
2.3
11
100
0
50
24
8
20
48
1.76
33982--34043
9
6.9
9
100
0
124
43
22
11
22
1.85
37230--37255
13
2.0
13
100
0
52
46
7
0
46
1.31
38332--38358
14
1.9
14
100
0
54
44
14
22
18
1.86

Tables:   1

The End!