Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015427.1 Corchorus olitorius cultivar O-4 contig15460, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  97686

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4529--4566
18
2.1
18
95
0
67
71
13
10
5
1.30
17000--17040
4
10.5
4
92
5
57
80
0
19
0
0.71
42769--42809
19
2.0
21
86
13
59
41
14
0
43
1.45
63442--63505
32
2.0
32
82
11
78
51
3
1
43
1.26
68085--68111
13
2.1
13
100
0
54
33
22
22
22
1.97
68209--68300
29
3.2
29
67
11
89
39
19
13
28
1.89
68191--68340
58
2.6
58
100
0
300
44
16
11
27
1.82
68228--68320
29
3.2
29
65
17
84
44
21
7
26
1.79
68238--68329
29
3.2
29
67
11
89
44
18
8
28
1.79
74874--75207
178
1.9
174
91
4
544
32
17
15
33
1.92
83152--83243
48
2.0
46
85
8
123
39
28
17
15
1.90
95272--97313
333
6.2
332
88
3
2971
33
15
15
35
1.90

Tables:   1

The End!