Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015429.1 Corchorus olitorius cultivar O-4 contig15462, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29064

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
190--1508
333
3.9
333
89
3
2015
33
16
15
35
1.90
2228--2539
159
2.0
159
98
0
606
21
2
26
50
1.62
2399--2624
110
2.0
110
99
0
443
23
3
24
49
1.66
2646--2766
60
2.0
60
95
0
215
23
10
29
35
1.89
21057--21095
15
2.6
15
87
0
60
20
66
12
0
1.24
24504--24554
27
2.0
27
85
11
72
54
3
0
41
1.19
25189--25231
4
10.8
4
94
0
77
23
0
25
51
1.49
27615--27670
2
28.0
2
88
0
85
46
1
1
50
1.22
28007--28089
22
3.8
21
73
17
64
57
1
2
38
1.19
28009--28057
25
2.0
25
84
8
64
59
0
0
40
0.98

Tables:   1

The End!