Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015438.1 Corchorus olitorius cultivar O-4 contig15471, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68625

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
138--258
67
1.9
64
83
11
158
32
18
14
34
1.91
4637--4705
31
2.2
31
100
0
138
13
26
7
53
1.65
17275--17320
25
1.9
24
91
8
76
34
6
8
50
1.59
32741--32908
31
5.5
31
67
18
120
33
19
18
27
1.95
32745--32907
60
2.7
60
93
0
263
34
19
18
26
1.95
32950--33050
31
3.3
31
68
15
93
22
19
20
36
1.95
32949--33110
60
2.7
60
86
1
227
26
19
18
35
1.95
34107--34145
17
2.5
15
84
12
51
5
10
2
82
0.93
38266--38306
21
2.0
21
85
9
57
36
14
7
41
1.74
38724--38914
81
2.3
82
88
4
280
39
9
16
34
1.81
49913--50185
98
2.7
99
79
10
293
37
20
10
31
1.86
51975--52001
3
9.0
3
100
0
54
0
33
0
66
0.92

Tables:   1

The End!