Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015441.1 Corchorus olitorius cultivar O-4 contig15474, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10866

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3328--3357
11
2.7
11
94
0
51
20
10
0
70
1.16
5520--5579
32
1.9
31
83
6
77
16
8
13
61
1.55
7067--7602
295
1.8
296
84
2
747
35
13
15
36
1.86
7640--7915
138
2.0
137
98
0
534
30
21
16
30
1.96
8387--8411
13
1.9
13
100
0
50
52
8
16
24
1.70
7817--8890
331
3.2
331
81
6
1339
32
15
16
34
1.91
8897--10864
328
6.0
329
82
3
2239
32
15
14
36
1.88

Tables:   1

The End!