Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015450.1 Corchorus olitorius cultivar O-4 contig15483, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11960

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
557--587
11
2.9
11
95
4
55
83
6
0
9
0.79
2390--2460
37
1.9
37
100
0
142
33
9
5
50
1.59
7667--7946
33
8.5
33
98
0
533
31
6
27
35
1.82
7916--7982
20
3.1
22
63
10
57
34
5
31
28
1.81
7920--7988
22
3.2
22
65
10
61
36
7
28
27
1.84
7926--8093
41
4.1
41
90
3
241
36
8
26
27
1.85
9858--10364
263
1.9
261
81
6
596
36
12
16
34
1.86
10552--11960
331
4.3
328
76
7
1274
33
14
16
34
1.90

Tables:   1

The End!