Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015452.1 Corchorus olitorius cultivar O-4 contig15485, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43290

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
166--217
27
1.9
27
92
7
88
75
3
13
7
1.17
2274--4483
336
6.6
335
91
2
3544
33
17
16
32
1.92
2274--4483
671
3.3
669
92
2
3587
33
17
16
32
1.92
7434--7534
31
3.3
31
69
15
102
37
18
19
23
1.94
7374--7534
60
2.7
60
90
1
243
36
18
18
27
1.93
7579--7740
61
2.7
61
89
1
247
29
19
16
35
1.93
21847--21905
5
11.6
5
80
10
66
71
5
23
0
1.06
37084--38588
319
4.6
321
80
7
1488
35
15
14
34
1.88
41638--41898
31
8.9
31
85
9
338
32
21
18
27
1.96
41638--41922
57
5.0
57
84
11
368
32
21
17
27
1.96
41638--41935
115
2.6
109
85
9
377
32
22
17
27
1.96
41874--41935
24
2.5
24
89
5
97
30
29
14
25
1.95
42202--42236
17
2.1
17
100
0
70
34
11
17
37
1.85

Tables:   1

The End!