Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015459.1 Corchorus olitorius cultivar O-4 contig15492, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20504

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51--835
332
2.4
331
82
6
969
36
14
14
34
1.86
1222--1251
15
1.9
16
93
6
53
53
3
0
43
1.17
2690--3069
201
1.9
200
87
11
569
40
16
18
24
1.90
6976--7011
10
3.7
10
88
3
56
0
33
11
55
1.35
8411--8448
15
2.4
16
82
4
51
13
21
0
65
1.26
15600--15698
29
3.3
29
68
15
94
26
19
20
34
1.96
15600--15728
60
2.2
59
94
4
224
25
17
20
35
1.95

Tables:   1

The End!