Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015460.1 Corchorus olitorius cultivar O-4 contig15493, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80660

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17960--18017
19
2.9
21
79
7
66
41
10
17
31
1.83
38463--38488
2
13.0
2
100
0
52
50
0
0
50
1.00
42445--42475
12
2.6
12
89
0
53
80
0
12
6
0.89
42694--42724
16
1.9
16
93
0
53
80
0
19
0
0.71
47303--47413
54
2.1
54
96
0
204
15
27
36
20
1.93
58489--58553
32
2.0
32
100
0
130
24
12
15
47
1.79
61100--61155
29
2.0
28
85
3
76
32
10
17
39
1.84
69114--69145
2
16.0
2
100
0
64
50
0
0
50
1.00
69190--69300
54
2.0
56
85
5
154
15
21
27
36
1.93
70382--70415
2
17.0
2
100
0
68
50
0
0
50
1.00
73074--73116
6
7.2
6
89
0
68
0
37
0
62
0.95
73074--73138
24
2.7
24
83
7
69
3
35
3
58
1.29
73310--73337
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!