Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015467.1 Corchorus olitorius cultivar O-4 contig15500, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64028

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7180--7204
10
2.5
10
100
0
50
16
0
40
44
1.47
21778--21836
29
2.0
29
100
0
118
44
28
6
20
1.77
25274--25344
30
2.4
28
86
6
88
32
12
12
42
1.81
28083--28224
71
2.0
71
90
2
223
31
14
21
32
1.93
28814--28838
2
12.5
2
100
0
50
0
48
0
52
1.00
30267--30311
23
2.0
23
95
0
81
33
37
4
24
1.76
34089--34127
21
1.9
21
89
5
62
7
28
0
64
1.21
44255--44436
96
1.9
96
83
2
240
42
12
18
26
1.86
52356--52413
20
2.8
21
84
2
73
31
12
24
32
1.91

Tables:   1

The End!