Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015485.1 Corchorus olitorius cultivar O-4 contig15518, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14295

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3340--3549
38
5.7
38
85
5
245
31
15
23
29
1.95
3361--3519
76
2.1
76
93
0
273
27
17
25
29
1.97
4019--4184
81
2.0
81
96
0
305
34
11
22
31
1.90
5081--5112
16
2.0
16
93
0
55
50
21
18
9
1.75
5981--6005
11
2.3
11
100
0
50
84
0
8
8
0.79
9715--9771
22
2.6
23
80
8
73
35
7
15
42
1.75
9735--9837
44
2.3
44
78
6
102
37
9
12
39
1.76
10655--10683
13
2.2
13
100
0
58
37
6
13
41
1.72
12681--12845
22
7.6
22
76
8
133
41
15
12
30
1.84
12870--12966
22
4.5
22
80
2
99
30
18
10
40
1.84
12881--12966
44
2.0
43
84
4
111
30
20
9
39
1.84

Tables:   1

The End!