Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015499.1 Corchorus olitorius cultivar O-4 contig15532, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9833

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
585--627
11
3.9
11
81
0
50
39
20
11
27
1.88
1800--1850
26
1.9
27
92
4
86
62
13
1
21
1.40
2861--2977
60
2.0
60
91
0
189
17
23
23
35
1.95
2990--3071
27
3.0
27
98
0
155
14
15
23
46
1.83
3490--3541
3
17.3
3
100
0
104
65
0
0
34
0.93
7963--7987
13
1.9
13
100
0
50
56
0
0
44
0.99
8362--8390
2
14.5
2
100
0
58
51
0
0
48
1.00

Tables:   1

The End!