Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015503.1 Corchorus olitorius cultivar O-4 contig15536, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37964

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3023--3068
19
2.4
19
88
0
65
21
36
30
10
1.88
4759--4783
1
25.0
1
100
0
50
100
0
0
0
0.00
7299--7325
10
2.7
10
100
0
54
85
7
0
7
0.75
12582--12651
35
2.0
36
91
2
115
31
5
17
45
1.71
22549--22583
15
2.4
15
85
4
54
45
8
20
25
1.79
22573--22617
15
3.0
15
81
12
56
37
13
11
37
1.80
26040--26154
60
1.9
61
80
8
137
36
20
13
30
1.90
26755--26789
6
5.8
6
90
10
54
82
14
2
0
0.77
26756--26781
11
2.4
11
100
0
52
84
15
0
0
0.62
29590--29649
21
2.8
21
71
19
52
60
3
3
33
1.30

Tables:   1

The End!