Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015506.1 Corchorus olitorius cultivar O-4 contig15539, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15674

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3400--3475
29
2.6
30
76
14
95
32
21
5
40
1.75
3906--3948
15
2.7
16
89
7
61
67
13
6
11
1.41
5476--5545
28
2.4
30
81
11
83
18
30
15
35
1.92
5493--5556
28
2.2
28
78
10
67
21
25
17
35
1.95
8561--8669
21
5.2
21
62
16
64
49
14
6
29
1.68
8548--8670
42
2.9
42
97
0
228
47
15
8
29
1.74
8736--8851
57
2.0
57
93
0
196
43
1
20
34
1.62
9154--9192
17
2.2
18
90
9
62
38
20
7
33
1.81

Tables:   1

The End!