Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015514.1 Corchorus olitorius cultivar O-4 contig15547, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39154

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3472--3588
32
3.7
32
80
5
121
32
17
19
29
1.95
20203--20298
50
2.0
47
86
11
135
35
8
21
34
1.84
26858--26893
19
1.9
18
88
5
54
41
8
22
27
1.82
26846--26905
30
2.0
30
83
6
77
41
8
18
31
1.80
28144--28185
19
2.2
20
83
12
52
16
11
4
66
1.40
36091--36132
16
2.7
15
89
7
66
42
11
28
16
1.84
36180--36278
22
4.5
21
71
8
72
39
16
23
21
1.92
36132--36212
36
2.2
37
81
16
98
34
13
27
24
1.93

Tables:   1

The End!