Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015543.1 Corchorus olitorius cultivar O-4 contig15576, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5985

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50--130
39
2.0
40
90
2
128
51
7
3
37
1.48
121--167
25
1.9
24
95
4
85
29
6
8
55
1.55
2502--2614
56
2.0
58
85
3
158
33
20
15
30
1.93
5287--5311
2
12.5
2
100
0
50
0
48
0
52
1.00
5311--5339
2
14.5
2
100
0
58
48
0
0
51
1.00

Tables:   1

The End!