Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015547.1 Corchorus olitorius cultivar O-4 contig15580, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30285

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6889--6950
2
31.5
2
86
3
90
46
1
3
48
1.28
10853--10919
35
1.9
35
87
0
98
35
29
19
14
1.92
12766--12808
22
2.0
20
82
8
50
39
20
0
39
1.53
14767--14800
17
1.9
17
94
5
59
38
5
8
47
1.59
17117--17151
4
9.0
4
87
6
54
71
0
0
28
0.86
17086--17151
11
5.9
11
76
16
57
71
0
4
24
1.05
18107--18165
20
3.0
20
97
0
109
47
10
1
40
1.47
19408--19449
13
3.4
12
81
12
50
69
0
0
30
0.89
19409--19459
19
2.8
19
86
13
65
70
0
0
29
0.87
19409--19459
6
8.5
6
83
16
70
70
0
0
29
0.87

Tables:   1

The End!