Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015555.1 Corchorus olitorius cultivar O-4 contig15588, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22466

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6134--6410
22
12.6
22
74
6
168
37
17
11
32
1.87
6444--6783
22
15.5
22
66
13
121
34
18
8
39
1.81
7174--7207
2
17.0
2
100
0
68
50
0
0
50
1.00
7348--7431
22
3.8
22
71
12
73
38
15
10
35
1.82
7361--7449
44
2.0
44
82
8
110
34
16
11
37
1.85
7776--7810
2
17.5
2
100
0
70
51
0
0
48
1.00
9779--9828
25
2.0
25
88
0
73
22
6
18
54
1.65
12283--12363
42
1.9
42
94
0
144
28
12
17
41
1.85
12445--12481
17
2.2
17
100
0
74
62
10
10
16
1.55
14619--14645
14
1.9
14
100
0
54
44
11
7
37
1.68
17955--17990
16
2.1
18
90
10
58
27
5
0
66
1.13

Tables:   1

The End!