Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015560.1 Corchorus olitorius cultivar O-4 contig15593, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4478

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43--89
14
3.4
14
76
5
51
51
10
6
31
1.62
734--811
4
20.8
4
77
17
71
76
1
20
1
0.92
944--1113
87
2.0
87
89
0
259
35
10
25
28
1.89
1890--2422
37
14.4
37
79
4
520
23
17
15
43
1.87
2158--2458
149
2.0
149
83
1
379
25
16
13
44
1.84
2532--2840
54
5.7
54
82
5
315
28
16
21
34
1.95
2893--2970
33
2.4
33
91
0
120
43
17
6
32
1.75
3127--3342
7
30.9
7
99
0
405
57
26
0
15
1.39

Tables:   1

The End!