Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015561.1 Corchorus olitorius cultivar O-4 contig15594, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7702

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
479--507
10
3.0
10
95
5
51
72
0
0
27
0.85
3039--3286
123
2.0
123
100
0
496
28
14
11
45
1.80
6057--6151
22
4.5
22
68
17
67
37
11
11
38
1.78
6170--6212
22
2.0
22
95
0
77
34
11
20
32
1.89
6175--6244
22
3.2
22
82
10
72
35
11
18
34
1.87
6204--6245
22
1.9
22
95
0
75
33
11
14
40
1.82
6307--6442
22
6.2
22
76
7
125
34
10
18
36
1.85
6321--6472
43
3.5
43
78
7
148
36
10
17
35
1.85
6589--6625
18
2.1
18
90
5
58
32
13
8
45
1.73
7407--7436
2
15.5
2
93
6
53
50
0
0
50
1.00

Tables:   1

The End!