Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015562.1 Corchorus olitorius cultivar O-4 contig15595, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24115

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2490--2545
22
2.6
22
82
2
69
51
7
10
30
1.63
2820--2906
20
4.2
20
73
5
57
48
19
8
24
1.75
2820--2877
21
2.8
20
80
10
62
48
22
8
20
1.77
2907--2962
22
2.6
22
72
13
53
51
12
8
26
1.69
2951--3129
86
2.1
86
93
1
304
49
10
10
30
1.69
3542--3591
25
2.0
26
84
11
68
60
10
12
18
1.59
5349--5453
21
4.6
21
73
19
84
43
20
23
12
1.85
5376--5476
30
3.7
30
72
22
112
42
19
25
11
1.86
5348--5476
51
2.5
51
94
0
222
42
20
24
12
1.86
5528--5567
18
2.2
18
90
0
62
47
15
25
12
1.80
5606--5653
18
2.7
18
90
0
69
47
16
29
6
1.71
11734--11771
11
3.5
11
89
10
51
39
0
2
57
1.12
20638--24099
329
10.6
329
79
7
3099
32
14
15
36
1.89

Tables:   1

The End!