Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015574.1 Corchorus olitorius cultivar O-4 contig15607, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39126

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
160--261
51
2.0
52
81
9
120
22
23
13
40
1.90
6700--6737
19
1.9
19
89
5
58
50
7
13
28
1.69
7674--7761
43
2.0
43
97
0
167
18
23
9
48
1.76
7865--7962
48
2.0
48
94
0
169
50
15
10
24
1.75
8416--8448
2
16.5
2
100
0
66
51
0
0
48
1.00
8823--8866
15
2.9
15
93
0
70
6
31
11
50
1.65
34412--34465
19
2.6
21
77
19
60
38
3
18
38
1.69
36957--36995
17
2.2
18
86
13
55
41
0
2
56
1.13
36973--37002
12
2.5
12
94
0
51
43
0
0
56
0.99
37284--37337
23
2.3
23
90
0
90
33
9
3
53
1.50
37627--37666
16
2.4
17
87
8
55
10
17
15
57
1.64

Tables:   1

The End!