Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWUE01015576.1 Corchorus olitorius cultivar O-4 contig15609, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 83656
ACGTcount: A:0.34, C:0.18, G:0.17, T:0.32
Found at i:2728 original size:2 final size:2
Alignment explanation
Indices: 2721--2749 Score: 58
Period size: 2 Copynumber: 14.5 Consensus size: 2
2711 GCCGATTTCT
2721 TG TG TG TG TG TG TG TG TG TG TG TG TG TG T
1 TG TG TG TG TG TG TG TG TG TG TG TG TG TG T
2750 ATATATATAT
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 27 1.00
ACGTcount: A:0.00, C:0.00, G:0.48, T:0.52
Consensus pattern (2 bp):
TG
Found at i:4549 original size:29 final size:29
Alignment explanation
Indices: 4507--4597 Score: 164
Period size: 29 Copynumber: 3.1 Consensus size: 29
4497 AAATGCTCAC
*
4507 TAAACGACCTATATACATTTTATGTAACT
1 TAAACGACCTATATACATTTTATATAACT
4536 TAAACGACCTATATACATTTTATATAACT
1 TAAACGACCTATATACATTTTATATAACT
*
4565 TAAACGACCTATATACATTTTCTATAACT
1 TAAACGACCTATATACATTTTATATAACT
4594 TAAA
1 TAAA
4598 TCCATTATTT
Statistics
Matches: 60, Mismatches: 2, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
29 60 1.00
ACGTcount: A:0.41, C:0.18, G:0.04, T:0.37
Consensus pattern (29 bp):
TAAACGACCTATATACATTTTATATAACT
Found at i:5395 original size:26 final size:25
Alignment explanation
Indices: 5366--5414 Score: 62
Period size: 26 Copynumber: 1.9 Consensus size: 25
5356 TCCTTATTCT
* *
5366 TCCTCTTCTTAACAAGTTGCTTTTTC
1 TCCTCTTATTAACAAATTG-TTTTTC
*
5392 TCCTTTTATTAACAAATTGTTTT
1 TCCTCTTATTAACAAATTGTTTT
5415 CTTATTTATC
Statistics
Matches: 20, Mismatches: 3, Indels: 1
0.83 0.12 0.04
Matches are distributed among these distances:
25 4 0.20
26 16 0.80
ACGTcount: A:0.20, C:0.20, G:0.06, T:0.53
Consensus pattern (25 bp):
TCCTCTTATTAACAAATTGTTTTTC
Found at i:15068 original size:36 final size:36
Alignment explanation
Indices: 15021--15106 Score: 127
Period size: 36 Copynumber: 2.4 Consensus size: 36
15011 AAGTTCTAAT
15021 GGAAATTAGGTAAAAGCAAACAAAGACTTAATTCAG
1 GGAAATTAGGTAAAAGCAAACAAAGACTTAATTCAG
* ** *
15057 GGAAATTAGGTAAAATCAGTCAAAGACTTAATTCAT
1 GGAAATTAGGTAAAAGCAAACAAAGACTTAATTCAG
*
15093 GGAAATTAAGTAAA
1 GGAAATTAGGTAAA
15107 GAGACAATAA
Statistics
Matches: 45, Mismatches: 5, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
36 45 1.00
ACGTcount: A:0.49, C:0.09, G:0.19, T:0.23
Consensus pattern (36 bp):
GGAAATTAGGTAAAAGCAAACAAAGACTTAATTCAG
Found at i:15153 original size:33 final size:33
Alignment explanation
Indices: 15074--15207 Score: 121
Period size: 33 Copynumber: 3.9 Consensus size: 33
15064 AGGTAAAATC
* *
15074 AGTCAA-AGACTTAATTCAT-GGAAATTAAGTAAAG
1 AGTCAATAAACTTAATTC-TGGGTAATTAAGT--AG
*
15108 AGACAATAAACTTAATTCTGGGTAATTAAGTAG
1 AGTCAATAAACTTAATTCTGGGTAATTAAGTAG
* *
15141 AGTCAATAAACTTAATTC-GACGTAATTAAGTAA
1 AGTCAATAAACTTAATTCTG-GGTAATTAAGTAG
**
15174 AGTCAATAAAGACCTTAATTCAAGGTAATTAAGT
1 AGTCAAT-AA-A-CTTAATTCTGGGTAATTAAGT
15208 GGGGACATTA
Statistics
Matches: 85, Mismatches: 8, Indels: 12
0.81 0.08 0.11
Matches are distributed among these distances:
32 1 0.01
33 37 0.44
34 8 0.09
35 21 0.25
36 18 0.21
ACGTcount: A:0.45, C:0.10, G:0.16, T:0.29
Consensus pattern (33 bp):
AGTCAATAAACTTAATTCTGGGTAATTAAGTAG
Found at i:15202 original size:36 final size:35
Alignment explanation
Indices: 15042--15207 Score: 151
Period size: 36 Copynumber: 4.7 Consensus size: 35
15032 AAAAGCAAAC
* * * * *
15042 AAAGACTTAATTCAGGGAAATTAGGTAAAATCAGT
1 AAAGACTTAATTCAAGGTAATTAAGTAAAGTCAAT
* * *
15077 CAAAGACTTAATTCATGGAAATTAAGTAAAGAGACAAT
1 -AAAGACTTAATTCAAGGTAATTAAGT-AA-AGTCAAT
** *
15115 -AA-ACTTAATTCTGGGTAATTAAGTAGAGTCAAT
1 AAAGACTTAATTCAAGGTAATTAAGTAAAGTCAAT
* *
15148 -AA-ACTTAATTCGACGTAATTAAGTAAAGTCAAT
1 AAAGACTTAATTCAAGGTAATTAAGTAAAGTCAAT
15181 AAAGACCTTAATTCAAGGTAATTAAGT
1 AAAGA-CTTAATTCAAGGTAATTAAGT
15208 GGGGACATTA
Statistics
Matches: 109, Mismatches: 16, Indels: 10
0.81 0.12 0.07
Matches are distributed among these distances:
33 35 0.32
34 3 0.03
35 20 0.18
36 45 0.41
37 2 0.02
38 4 0.04
ACGTcount: A:0.45, C:0.10, G:0.16, T:0.28
Consensus pattern (35 bp):
AAAGACTTAATTCAAGGTAATTAAGTAAAGTCAAT
Found at i:28589 original size:14 final size:14
Alignment explanation
Indices: 28544--28599 Score: 53
Period size: 14 Copynumber: 4.1 Consensus size: 14
28534 TTTTAAGAAT
*
28544 TAAATTATATTAAT-
1 TAAA-TATATAAATA
*
28558 TAATTATATAAATA
1 TAAATATATAAATA
* *
28572 TAAATATATAATTG
1 TAAATATATAAATA
28586 TAAATATA-AAATA
1 TAAATATATAAATA
28599 T
1 T
28600 GATATATACT
Statistics
Matches: 34, Mismatches: 7, Indels: 3
0.77 0.16 0.07
Matches are distributed among these distances:
13 12 0.35
14 22 0.65
ACGTcount: A:0.55, C:0.00, G:0.02, T:0.43
Consensus pattern (14 bp):
TAAATATATAAATA
Found at i:28716 original size:16 final size:17
Alignment explanation
Indices: 28692--28724 Score: 50
Period size: 16 Copynumber: 2.0 Consensus size: 17
28682 ATAGTGTACG
28692 TATAAATTATAT-TTAA
1 TATAAATTATATATTAA
*
28708 TATATATTATATATTAA
1 TATAAATTATATATTAA
28725 CAAATAAAAA
Statistics
Matches: 15, Mismatches: 1, Indels: 1
0.88 0.06 0.06
Matches are distributed among these distances:
16 11 0.73
17 4 0.27
ACGTcount: A:0.48, C:0.00, G:0.00, T:0.52
Consensus pattern (17 bp):
TATAAATTATATATTAA
Found at i:33398 original size:126 final size:126
Alignment explanation
Indices: 33268--33497 Score: 363
Period size: 126 Copynumber: 1.8 Consensus size: 126
33258 GATGAGATCT
* * * *
33268 GAATCCTTGTTGGTCCCATCAGGCGTGCCAAAAAGAGATGTTGATGCGCTGAGGTGGGG-TCAAA
1 GAATCCTTCTTGGTCCCACCAGGCATGCCAAAAAGAGATGTTGATGCGCTGAAGTGGGGCT-AAA
* *
33332 GCAAAAAAATAATAAGAACAAAGTTGGGGATCGCCAACTTAAATGTAGATCTGAATGTAGAA
65 GCAAAAAAATAACAAGAACAAAGTTGGGGATCACCAACTTAAATGTAGATCTGAATGTAGAA
* * *
33394 GAATCCTTCTTGGTCCCACCGGGCATGGCAAAAAGAGATGTTGGTGCGCTGAAGTGGGGCTAAAG
1 GAATCCTTCTTGGTCCCACCAGGCATGCCAAAAAGAGATGTTGATGCGCTGAAGTGGGGCTAAAG
33459 CAAAAAAATAACAAGAACAAAGTTGGGGATCACCAACTT
66 CAAAAAAATAACAAGAACAAAGTTGGGGATCACCAACTT
33498 GAAAGTGAAA
Statistics
Matches: 94, Mismatches: 9, Indels: 2
0.90 0.09 0.02
Matches are distributed among these distances:
126 93 0.99
127 1 0.01
ACGTcount: A:0.35, C:0.17, G:0.27, T:0.21
Consensus pattern (126 bp):
GAATCCTTCTTGGTCCCACCAGGCATGCCAAAAAGAGATGTTGATGCGCTGAAGTGGGGCTAAAG
CAAAAAAATAACAAGAACAAAGTTGGGGATCACCAACTTAAATGTAGATCTGAATGTAGAA
Found at i:36776 original size:48 final size:48
Alignment explanation
Indices: 36723--36867 Score: 142
Period size: 49 Copynumber: 3.0 Consensus size: 48
36713 CACTCAAAGC
36723 AATCTTTTACATTTTC-TGCACTTTTTCTCAATTTTTACA-ACAAAATTG
1 AATC-TTTACATTTTCTTGCACTTTTTCTCAATTTTTA-AGACAAAATTG
*
36771 AATCTTT--ATTTCTCCTTGCACATTTTTCTTAATTTTTAAGACAAAATTG
1 AATCTTTACATTT-T-CTTGCAC-TTTTTCTCAATTTTTAAGACAAAATTG
* * *
36820 AATATTTAC-TTTTCATTGCTCTTTTTATCAATTTTT--GTACAAAATTG
1 AATCTTTACATTTTC-TTGCACTTTTTCTCAATTTTTAAG-ACAAAATTG
36867 A
1 A
36868 TTGGCACGCT
Statistics
Matches: 83, Mismatches: 5, Indels: 19
0.78 0.05 0.18
Matches are distributed among these distances:
45 4 0.05
46 2 0.02
47 14 0.17
48 24 0.29
49 36 0.43
50 3 0.04
ACGTcount: A:0.29, C:0.16, G:0.06, T:0.50
Consensus pattern (48 bp):
AATCTTTACATTTTCTTGCACTTTTTCTCAATTTTTAAGACAAAATTG
Found at i:48057 original size:3 final size:3
Alignment explanation
Indices: 48051--48076 Score: 52
Period size: 3 Copynumber: 8.7 Consensus size: 3
48041 CCAAAAAAAA
48051 AAG AAG AAG AAG AAG AAG AAG AAG AA
1 AAG AAG AAG AAG AAG AAG AAG AAG AA
48077 AATAATAAGG
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
3 23 1.00
ACGTcount: A:0.69, C:0.00, G:0.31, T:0.00
Consensus pattern (3 bp):
AAG
Found at i:53748 original size:19 final size:19
Alignment explanation
Indices: 53724--53763 Score: 71
Period size: 19 Copynumber: 2.1 Consensus size: 19
53714 GACCAATAAC
*
53724 CTTCCTGTTAGTTCACCGT
1 CTTCCTATTAGTTCACCGT
53743 CTTCCTATTAGTTCACCGT
1 CTTCCTATTAGTTCACCGT
53762 CT
1 CT
53764 GATAAAGTTT
Statistics
Matches: 20, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
19 20 1.00
ACGTcount: A:0.12, C:0.33, G:0.12, T:0.42
Consensus pattern (19 bp):
CTTCCTATTAGTTCACCGT
Found at i:57971 original size:21 final size:21
Alignment explanation
Indices: 57947--57987 Score: 57
Period size: 21 Copynumber: 2.0 Consensus size: 21
57937 CCTAAGATGC
*
57947 ATAAA-AATAAATCTTAAATCT
1 ATAAACAAGAAAT-TTAAATCT
57968 ATAAACAAGAAATTTAAATC
1 ATAAACAAGAAATTTAAATC
57988 GAAAAATCCT
Statistics
Matches: 18, Mismatches: 1, Indels: 2
0.86 0.05 0.10
Matches are distributed among these distances:
21 12 0.67
22 6 0.33
ACGTcount: A:0.59, C:0.10, G:0.02, T:0.29
Consensus pattern (21 bp):
ATAAACAAGAAATTTAAATCT
Found at i:69839 original size:61 final size:61
Alignment explanation
Indices: 69744--69866 Score: 237
Period size: 61 Copynumber: 2.0 Consensus size: 61
69734 ATCGTTTCTA
69744 GTTTTAATGACTTGAATTTGCTTTGTTGAAGATTATATATAATTTAAGCATTGCAAAATAT
1 GTTTTAATGACTTGAATTTGCTTTGTTGAAGATTATATATAATTTAAGCATTGCAAAATAT
*
69805 GTTTTAGTGACTTGAATTTGCTTTGTTGAAGATTATATATAATTTAAGCATTGCAAAATAT
1 GTTTTAATGACTTGAATTTGCTTTGTTGAAGATTATATATAATTTAAGCATTGCAAAATAT
69866 G
1 G
69867 ATTGTTTCTA
Statistics
Matches: 61, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
61 61 1.00
ACGTcount: A:0.33, C:0.07, G:0.16, T:0.44
Consensus pattern (61 bp):
GTTTTAATGACTTGAATTTGCTTTGTTGAAGATTATATATAATTTAAGCATTGCAAAATAT
Found at i:70543 original size:799 final size:796
Alignment explanation
Indices: 69009--70604 Score: 2611
Period size: 799 Copynumber: 2.0 Consensus size: 796
68999 ATCGTTTCTA
*
69009 GTTTTAGTGACTTGAATTTGCTTTGTTGAAGTTTATATATAAGTTAAGCATTGCAAAATATGATT
1 GTTTTAGTGACTTGAATTTGCTTTGTTGAAGATTATATATAAGTTAAGCATTGCAAAATATGATT
69074 GTTCCTAGTTTTACTGACTCGAATTTGCTTTTTGAATTTTATTATCAGCAACAACTATGGTTCAT
66 GTTCCTAGTTTTACTGACTCGAATTTGCTTTTTGAATTTTATTATCAGCAACAACTATGGTTCAT
* * *
69139 GTACAACCATTATTGATACGTGTAATACCCGCAATAATTGGGATGTTTGTCTCAATTTTTCTTAG
131 GTACAACCATTATGGATACGTGTAATACCCGCAATAATTGGGATATTTGTCTCAATTTTTCTTAA
* * * * **
69204 TTATCTATGGTGATCGGAATAGGATCATATTAATTTGGTGAAAGTTGGGATGGATGGGCCGACCC
196 TTATCTATGGCGATCAGAATAGGATCATATTAATATGGCGAAAGTTGGGAAAGATGGGCCGACCC
* *
69269 TGACATATCATACCTTTCAATCGGAAATTGTGCTCGATCAAGCATCTAATCTAGTACATTACGGA
261 TGACATATCATACCTTTCAATCGAAAATTATGCTCGATCAAGCATCTAATCTAGTACATTACGGA
* *
69334 TCTTTTAACCATAACTTATTTGGCAACATATTATTTTATCTTATCCAATTAATTCGACCCATAGA
326 TCTTTTAACCATAACTTATTTGGCAACAGATTATTTTATCTTATCCAAATAATTCGACCCATAGA
* * *
69399 TCAGAGAAAGGGATCGTCGGTTCAGGAAATGAATATTTTTTAATGCACTAGCCTATATATATATC
391 TCAGAGAAAGCGATCGTCGGTGCAGAAAATGAATATTTTTTAATGCACTAGCCTATATATATATC
* * *
69464 CTCTTTTGTGTGTTAGTAATTTTGATGGTGGATACTTCTTTCCATCGTTATCTCCATACTTTTAA
456 CTCTTTTGTGTGTTAGTAATTTTGATGGTGGATACTTCTTGCCATCATTATCTCCATACTTTCAA
69529 TGTTTAGAATAGCGGGAGCGTCTATTCACCCAACGGTTCTTCATTTTGTCAATCTTAAGTTGCCA
521 TGTTTAGAATAGCGGGAGCGTCTATTCACCCAACGGTTCTTCATTTTGTCAATCTTAAGTTGCCA
* *
69594 TTTATGTCAAAGATATCTTGCATTTGGATGATTAAATTCAATTGGGAGGAGACACATACATAGTG
586 TTTATGTCAAAGATATCTTGCATTTGAATGATTAAATTCAATTGAGAGGAGACACATACATAGTG
*
69659 CATGATGTCACAATATTGGTTACAGATCTCGTAAGATCAGATGGAGATATATGCATGTATCAACT
651 CATGATGTCACAATATTGGTTACAGATCTCGTAAGATCAGATGGAGATATAGGCATGTATCAACT
*
69724 GCAAAATGTGATCGTTTCTAGTTTTAATGACTTGAATTTGCTTTGTTGAAGATTATATATAATTT
716 GCAAAATATGATCGTTTCTAGTTTTAATGACTTGAATTTGCTTTGTTGAAGATTATATATAATTT
*
69789 AAGCATTGCAAAATAT
781 AAACATTGCAAAATAT
*
69805 GTTTTAGTGACTTGAATTTGCTTTGTTGAAGATTATATATAATTTAAGCATTGCAAAATATGATT
1 GTTTTAGTGACTTGAATTTGCTTTGTTGAAGATTATATATAAGTTAAGCATTGCAAAATATGATT
* * *
69870 GTTTCTAGTTTTACTGACTTGAATTTGCTTTTTAGAATTTTATTATCAGCAGCAACTATGGTTCA
66 GTTCCTAGTTTTACTGACTCGAATTTGCTTTTT-GAATTTTATTATCAGCAACAACTATGGTTCA
* * * *
69935 TGTACACCCATTATGGATTCGTGTAATACCCTCAATAATTGGGATATTTGTCTTAATTTTTCTTA
130 TGTACAACCATTATGGATACGTGTAATACCCGCAATAATTGGGATATTTGTCTCAATTTTTCTTA
* * * * * *
70000 ATTATCTGTGGCGATCAGAATTGGATCATATTGATATGGCGAAAGTTGGGAAAGATTGGTCGACT
195 ATTATCTATGGCGATCAGAATAGGATCATATTAATATGGCGAAAGTTGGGAAAGATGGGCCGACC
* * *
70065 CTGACATATCATATCTTTCAATCGAAAATTATGCTCGAT-AAGCATCTGATAC-AGTGCATTACG
260 CTGACATATCATACCTTTCAATCGAAAATTATGCTCGATCAAGCATCTAAT-CTAGTACATTACG
* *
70128 GATCTTTTACCCGTAACTTATTTGGCTAACAGATTATTTTATCTTATCCAAATAATTCGACCCAT
324 GATCTTTTAACCATAACTTATTTGGC-AACAGATTATTTTATCTTATCCAAATAATTCGACCCAT
70193 AGATCAGAGAAAGCGATCGTCGGTGCAGAAAATGAATATTTTTTTCAATGCACTAGCCTATATAT
388 AGATCAGAGAAAGCGATCGTCGGTGCAGAAAATGAATA-TTTTTT-AATGCACTAGCCTATATAT
* *
70258 GTATCCTGTTTTGTGTGTTAGTAATTTTGATGGTGGATACTTCTTGCCATCATTATCTCCATACT
451 ATATCCTCTTTTGTGTGTTAGTAATTTTGATGGTGGATACTTCTTGCCATCATTATCTCCATACT
* * **
70323 TTCAATGTTTAGAATAGCGGGAGCGTCTATTCACCCAATGTTTCTTTGTTTTGTCAATCTTAAGT
516 TTCAATGTTTAGAATAGCGGGAGCGTCTATTCACCCAACGGTTCTTCATTTTGTCAATCTTAAGT
*
70388 TTCCATTTATGTCAAAGATATCTTGCATTTGAATGATTAAATTCAATTGAGAGGAGACACATACA
581 TGCCATTTATGTCAAAGATATCTTGCATTTGAATGATTAAATTCAATTGAGAGGAGACACATACA
* * *
70453 TAGTGCATGATGTCACAATATTGGTTATAGATCTCGTAAGATCTGATGGAGATATAGGTATGTAT
646 TAGTGCATGATGTCACAATATTGGTTACAGATCTCGTAAGATCAGATGGAGATATAGGCATGTAT
* * * *
70518 CAATTGCAAAATATGATCGTTTCTAGTTTTAGTGACTTGAATTTGTTTTGTTGAAGCTTATATAT
711 CAACTGCAAAATATGATCGTTTCTAGTTTTAATGACTTGAATTTGCTTTGTTGAAGATTATATAT
70583 AATTTAAACATTGCAAAATAT
776 AATTTAAACATTGCAAAATAT
70604 G
1 G
70605 ATTGATCCTA
Statistics
Matches: 737, Mismatches: 58, Indels: 7
0.92 0.07 0.01
Matches are distributed among these distances:
796 138 0.19
797 249 0.34
798 6 0.01
799 344 0.47
ACGTcount: A:0.29, C:0.15, G:0.18, T:0.38
Consensus pattern (796 bp):
GTTTTAGTGACTTGAATTTGCTTTGTTGAAGATTATATATAAGTTAAGCATTGCAAAATATGATT
GTTCCTAGTTTTACTGACTCGAATTTGCTTTTTGAATTTTATTATCAGCAACAACTATGGTTCAT
GTACAACCATTATGGATACGTGTAATACCCGCAATAATTGGGATATTTGTCTCAATTTTTCTTAA
TTATCTATGGCGATCAGAATAGGATCATATTAATATGGCGAAAGTTGGGAAAGATGGGCCGACCC
TGACATATCATACCTTTCAATCGAAAATTATGCTCGATCAAGCATCTAATCTAGTACATTACGGA
TCTTTTAACCATAACTTATTTGGCAACAGATTATTTTATCTTATCCAAATAATTCGACCCATAGA
TCAGAGAAAGCGATCGTCGGTGCAGAAAATGAATATTTTTTAATGCACTAGCCTATATATATATC
CTCTTTTGTGTGTTAGTAATTTTGATGGTGGATACTTCTTGCCATCATTATCTCCATACTTTCAA
TGTTTAGAATAGCGGGAGCGTCTATTCACCCAACGGTTCTTCATTTTGTCAATCTTAAGTTGCCA
TTTATGTCAAAGATATCTTGCATTTGAATGATTAAATTCAATTGAGAGGAGACACATACATAGTG
CATGATGTCACAATATTGGTTACAGATCTCGTAAGATCAGATGGAGATATAGGCATGTATCAACT
GCAAAATATGATCGTTTCTAGTTTTAATGACTTGAATTTGCTTTGTTGAAGATTATATATAATTT
AAACATTGCAAAATAT
Found at i:81201 original size:12 final size:12
Alignment explanation
Indices: 81184--81213 Score: 60
Period size: 12 Copynumber: 2.5 Consensus size: 12
81174 TCGGTCGAGC
81184 TCGAGCCGAGTA
1 TCGAGCCGAGTA
81196 TCGAGCCGAGTA
1 TCGAGCCGAGTA
81208 TCGAGC
1 TCGAGC
81214 TCCAGAATTT
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 18 1.00
ACGTcount: A:0.23, C:0.27, G:0.33, T:0.17
Consensus pattern (12 bp):
TCGAGCCGAGTA
Done.