Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015578.1 Corchorus olitorius cultivar O-4 contig15611, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31636

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16541--16646
53
2.0
53
96
0
194
27
6
12
53
1.62
21258--21385
60
2.1
60
97
0
238
31
25
21
22
1.98
24064--24121
19
2.9
19
84
5
71
29
20
12
37
1.89
24687--24749
12
5.0
13
86
3
85
38
11
22
28
1.88
24689--24749
24
2.4
25
91
5
97
37
11
22
27
1.89
25616--25641
10
2.6
10
100
0
52
30
7
23
38
1.83
25648--25674
10
2.7
10
100
0
54
48
11
11
29
1.73
25674--25698
8
3.1
8
100
0
50
40
12
24
24
1.88
25927--26061
69
1.9
70
90
1
218
29
15
12
42
1.84
27152--27183
17
1.9
16
93
6
55
62
15
0
21
1.32
27395--27430
13
2.6
14
86
8
56
0
16
0
83
0.65
30574--30914
139
2.6
124
77
13
369
51
3
9
35
1.51
30598--30853
139
1.8
139
90
0
413
50
3
9
36
1.51
31442--31513
31
2.3
31
83
7
83
34
30
20
13
1.92

Tables:   1

The End!