Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015597.1 Corchorus olitorius cultivar O-4 contig15630, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11946

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1269--1293
13
1.9
13
100
0
50
60
16
0
24
1.36
2406--2805
121
3.3
121
85
4
472
37
9
13
40
1.75
4224--4250
6
4.5
6
100
0
54
0
0
51
48
1.00
4383--4412
14
2.2
14
94
5
53
36
3
16
43
1.65
4612--4690
35
2.3
35
90
0
122
16
15
21
46
1.83
6455--6519
25
2.6
25
92
0
103
20
15
6
58
1.58
7660--7701
15
2.8
15
88
0
57
28
52
9
9
1.65
11863--11921
26
2.2
27
81
3
75
3
25
0
71
1.02
11866--11946
12
6.9
12
68
10
60
2
27
0
70
1.00

Tables:   1

The End!