Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015598.1 Corchorus olitorius cultivar O-4 contig15631, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11083

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1571--1627
19
2.9
19
77
12
62
15
31
31
21
1.94
5303--5343
20
2.0
20
95
0
73
26
24
17
31
1.97
5668--5746
28
2.9
27
84
3
104
40
26
15
17
1.89
5668--5746
27
2.9
28
86
3
108
40
26
15
17
1.89
6260--6747
30
16.1
30
90
3
632
49
18
13
19
1.80
6260--6735
91
5.2
91
90
3
703
48
18
13
19
1.80
6260--6747
61
8.1
60
91
2
703
49
18
13
19
1.80
7397--7455
26
2.3
26
93
0
100
42
18
22
16
1.89
7309--7629
177
1.8
177
95
0
579
38
16
21
23
1.93
7574--7629
26
2.2
26
86
0
76
41
25
17
16
1.89
9141--9181
13
3.1
13
89
3
55
43
12
7
36
1.70
9151--9189
16
2.6
16
88
11
57
41
10
7
41
1.68
9589--9621
2
16.5
2
100
0
66
48
0
0
51
1.00

Tables:   1

The End!