Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015607.1 Corchorus olitorius cultivar O-4 contig15640, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4949

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1606--2347
35
21.6
35
67
11
243
18
18
24
38
1.93
1606--1789
36
5.2
36
75
6
169
16
17
23
41
1.89
2010--2212
105
1.9
105
90
2
327
14
19
27
38
1.90
2154--2273
61
2.0
61
91
0
195
15
19
26
38
1.92
2209--2344
72
1.9
72
93
0
236
19
16
23
39
1.92

Tables:   1

The End!