Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015608.1 Corchorus olitorius cultivar O-4 contig15641, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28278

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14382--14406
13
1.9
13
100
0
50
8
4
16
72
1.24
14479--14507
10
2.7
11
94
5
51
3
6
0
89
0.57
16579--16623
10
4.4
10
83
5
54
11
4
0
84
0.76
17043--17251
40
5.3
38
75
12
127
37
13
19
29
1.90
17099--17776
40
17.0
40
87
2
909
37
10
20
31
1.86
17112--17776
120
5.5
120
93
0
1064
38
10
20
31
1.86
17880--18958
139
7.9
139
82
7
1280
38
17
18
26
1.92
18350--18592
117
2.1
118
95
0
434
37
16
19
25
1.93
18467--18958
138
3.5
139
94
0
851
38
17
18
25
1.92
20238--20263
9
2.9
9
100
0
52
0
0
7
92
0.39

Tables:   1

The End!