Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015618.1 Corchorus olitorius cultivar O-4 contig15651, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34880

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
292--335
17
2.5
17
81
3
52
38
9
31
20
1.84
5610--5645
17
2.1
18
89
5
56
5
22
0
72
1.05
5810--5855
20
2.3
20
88
3
67
47
8
17
26
1.76
5946--6027
27
3.0
28
85
7
98
41
24
14
19
1.89
9828--9892
28
2.3
28
82
12
80
13
15
20
50
1.77
11870--12016
74
2.0
75
82
1
179
38
14
13
33
1.85
23142--23207
30
2.2
30
94
0
114
45
4
22
27
1.72
23416--23443
13
2.2
13
100
0
56
46
0
0
53
1.00
23470--23523
27
2.0
28
85
3
74
38
5
9
46
1.59
33336--33373
18
2.1
18
85
9
51
42
0
0
57
0.98

Tables:   1

The End!