Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015619.1 Corchorus olitorius cultivar O-4 contig15652, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15969

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4902--4955
23
2.5
22
76
8
56
12
7
20
59
1.58
5372--5482
55
2.0
56
89
5
172
33
18
8
40
1.80
9122--9202
39
2.0
40
92
2
137
50
8
3
37
1.51
9193--9239
25
1.9
24
95
4
85
29
6
8
55
1.55
11535--11647
58
1.9
58
87
7
167
32
19
14
33
1.92
15210--15257
24
2.0
24
95
0
87
18
4
47
29
1.67

Tables:   1

The End!