Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015623.1 Corchorus olitorius cultivar O-4 contig15656, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13502

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
131--197
2
33.5
2
80
5
55
49
2
5
41
1.42
2766--2836
35
2.0
35
97
0
133
19
16
19
43
1.88
10437--10479
21
2.1
21
87
8
63
65
0
2
32
1.06
10659--10706
18
2.8
18
81
15
66
31
0
18
50
1.48
10651--10703
18
3.3
15
82
14
63
32
0
18
49
1.48
12462--12495
11
2.9
12
91
8
61
58
23
0
17
1.38
12759--12837
29
2.7
30
84
5
99
27
17
12
41
1.86
12986--13073
31
2.9
31
87
1
133
39
11
15
32
1.84
13220--13499
155
1.8
152
86
5
402
51
3
8
36
1.49

Tables:   1

The End!