Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015632.1 Corchorus olitorius cultivar O-4 contig15665, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26835

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2186--2239
15
3.5
15
82
2
63
12
0
72
14
1.13
2189--2227
20
1.9
20
89
5
60
12
0
76
10
1.01
2659--2691
17
1.9
17
93
0
57
57
0
0
42
0.98
2758--2805
22
2.2
22
81
7
53
31
2
2
64
1.16
4439--4472
3
11.3
3
93
0
59
32
2
0
64
1.08
4637--4941
110
2.8
109
82
5
359
34
12
12
40
1.81
7221--7306
30
2.9
30
91
0
145
29
22
29
19
1.98
21265--21687
211
2.0
211
98
0
810
36
15
12
34
1.86
22704--22739
19
1.9
18
88
5
54
30
22
8
38
1.83
25256--25294
21
1.9
21
85
15
55
12
28
12
46
1.79

Tables:   1

The End!