Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015634.1 Corchorus olitorius cultivar O-4 contig15667, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37296

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1768--1809
15
2.7
15
85
3
57
66
14
7
11
1.43
8414--8460
22
2.2
22
96
3
87
14
38
38
8
1.77
9663--9709
13
3.8
13
81
16
64
19
38
8
34
1.82
11373--11439
34
2.0
34
100
0
134
40
11
14
32
1.83
23841--23885
21
2.1
21
87
0
63
17
22
28
31
1.97
25677--25757
41
2.0
40
83
11
103
34
3
9
51
1.53
28242--28367
65
1.9
65
93
0
216
23
29
25
22
1.99
28556--28597
21
2.0
21
95
0
75
35
28
16
19
1.93
34458--34506
23
2.1
22
82
14
55
14
6
4
75
1.14
35623--35671
21
2.3
21
82
6
55
40
16
28
14
1.87

Tables:   1

The End!