Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015650.1 Corchorus olitorius cultivar O-4 contig15683, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27571

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3253--3287
18
1.9
18
88
0
52
14
25
22
37
1.92
5785--5824
2
20.0
2
100
0
80
50
0
0
50
1.00
14721--14763
20
2.0
21
82
17
52
58
6
2
32
1.38
20482--20902
178
2.3
179
80
6
485
32
14
16
37
1.89
20583--20987
178
2.3
177
78
5
399
31
13
17
37
1.89
21559--21618
29
2.0
31
80
6
70
65
1
13
20
1.35
23560--23587
2
14.0
2
100
0
56
50
0
0
50
1.00
25265--25290
8
3.2
8
100
0
52
0
61
0
38
0.96
27262--27294
2
17.0
2
93
6
59
51
0
0
48
1.00

Tables:   1

The End!