Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015651.1 Corchorus olitorius cultivar O-4 contig15684, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33907

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1098--1137
20
2.0
20
100
0
80
35
25
20
20
1.96
1520--1604
12
7.2
13
72
20
62
45
1
1
51
1.16
1523--1590
21
3.0
22
83
12
77
41
1
1
55
1.18
1523--1606
21
4.1
20
79
15
75
44
1
1
53
1.16
14498--15022
282
1.9
277
92
2
888
23
29
23
23
1.99
27050--27076
2
13.5
2
100
0
54
51
0
0
48
1.00
32949--33010
32
1.9
32
93
0
106
27
14
3
54
1.55
33169--33202
15
2.3
15
90
5
52
23
11
0
64
1.26
33790--33832
15
2.8
16
75
7
52
11
16
30
41
1.83

Tables:   1

The End!