Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015652.1 Corchorus olitorius cultivar O-4 contig15685, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18067

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1393--1420
14
2.0
14
100
0
56
57
0
42
0
0.99
7030--7065
7
5.6
7
81
18
51
44
11
0
44
1.39
7027--7070
18
2.4
18
96
3
79
45
11
0
43
1.40
8197--8240
2
21.5
2
90
4
70
47
4
0
47
1.22
13562--13714
51
3.0
51
98
0
288
37
20
12
29
1.89
15984--16044
12
5.3
12
71
9
56
8
14
0
77
0.99
15986--16044
24
2.6
22
86
7
75
8
15
0
76
1.01
15984--16051
21
3.1
21
76
12
73
7
17
0
75
1.03

Tables:   1

The End!