Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015656.1 Corchorus olitorius cultivar O-4 contig15689, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64585

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20512--20538
13
2.1
13
100
0
54
25
7
22
44
1.79
26194--26350
78
2.0
78
98
0
305
28
9
15
46
1.77
26723--26785
27
2.3
27
97
0
117
23
12
36
26
1.91
29992--30106
56
2.1
56
100
0
230
40
13
6
39
1.72
36504--36556
2
28.0
2
82
17
69
49
1
0
49
1.12
37267--37324
28
2.1
28
90
3
91
36
13
12
37
1.82
37564--37647
20
4.3
20
68
22
70
45
4
2
47
1.36
37550--37666
58
2.0
58
93
5
200
44
5
4
46
1.45
52229--52290
25
2.5
25
78
5
63
58
6
3
32
1.40
60197--60249
27
2.0
27
88
0
79
58
11
3
26
1.49
61858--61908
15
3.4
15
68
10
50
50
1
17
29
1.57
62434--62460
6
4.5
6
100
0
54
48
0
18
33
1.49

Tables:   1

The End!