Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015663.1 Corchorus olitorius cultivar O-4 contig15696, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22753

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
764--827
31
2.1
31
91
5
103
60
14
6
18
1.54
956--1002
21
2.2
20
85
10
67
12
29
12
44
1.80
1920--1962
22
1.9
23
95
4
79
37
13
23
25
1.92
6074--6108
11
3.2
11
91
0
61
80
17
2
0
0.84
10286--13254
334
9.1
332
76
10
2278
33
13
15
37
1.86
10325--12879
335
7.7
327
75
13
1383
33
13
15
37
1.86
14914--14951
20
1.9
20
88
0
58
26
26
13
34
1.93

Tables:   1

The End!