Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015666.1 Corchorus olitorius cultivar O-4 contig15699, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33496

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--32
2
16.0
2
100
0
64
50
0
0
50
1.00
1023--1085
28
2.2
29
88
8
94
19
22
17
41
1.90
9643--9766
40
3.1
39
87
6
169
29
21
13
35
1.92
9842--9936
48
2.0
49
85
2
129
29
18
12
38
1.88
19233--19280
16
3.1
16
76
14
55
6
12
0
81
0.87
25992--26028
19
1.9
19
88
0
56
16
27
13
43
1.85
29215--29349
49
2.9
47
83
8
159
31
14
5
48
1.66

Tables:   1

The End!