Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015668.1 Corchorus olitorius cultivar O-4 contig15701, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12866

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
418--446
15
1.9
15
100
0
58
51
27
6
13
1.66
820--858
20
1.9
21
84
5
53
69
12
0
17
1.19
2381--2637
130
2.0
130
90
5
403
47
2
11
38
1.52
4761--4795
12
2.8
13
91
8
63
37
14
22
25
1.92
7789--7880
45
2.0
45
93
0
157
34
14
28
22
1.93
10292--11274
397
2.5
397
95
1
1752
25
31
19
23
1.98
11557--11605
25
2.0
25
95
0
89
34
18
32
14
1.91
12293--12354
31
2.0
31
96
0
115
29
20
6
43
1.77
12366--12525
85
1.9
85
94
0
284
33
11
2
53
1.50

Tables:   1

The End!