Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015678.1 Corchorus olitorius cultivar O-4 contig15711, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13695

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4958--4982
1
25.0
1
100
0
50
0
0
0
100
0.00
5434--5500
33
2.0
33
100
0
134
38
0
20
40
1.53
7360--7385
2
13.0
2
100
0
52
0
0
50
50
1.00
8789--9023
129
1.8
128
90
1
382
54
11
16
17
1.70
8788--9023
65
3.7
63
83
4
312
55
11
16
17
1.69
10052--10077
2
13.0
2
100
0
52
50
0
0
50
1.00
10358--10388
16
1.9
16
93
0
53
45
19
3
32
1.66

Tables:   1

The End!