Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015682.1 Corchorus olitorius cultivar O-4 contig15715, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23635

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3162--3226
5
13.4
5
80
6
80
43
3
0
53
1.16
3146--3224
15
5.8
14
78
14
85
43
2
0
54
1.14
11375--11403
2
14.5
2
100
0
58
48
0
0
51
1.00
12899--12968
34
2.1
34
94
0
122
42
10
17
30
1.81
14255--14283
15
1.9
15
100
0
58
20
27
20
31
1.98
18093--18131
11
3.5
11
83
13
53
33
5
0
61
1.18
18298--18372
37
2.0
37
97
0
141
24
8
17
50
1.72
20830--20887
27
2.1
27
83
0
71
31
32
1
34
1.68
21161--21188
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!